Gene | SNP | Alleles (M/m) | MAF (%) | Model for association | Genotype count | Odds ratio (95Â % CI) | p value* | BH FDR p value* | Location | |||
---|---|---|---|---|---|---|---|---|---|---|---|---|
Genotype | ABPA | Atopic asthma | Healthya | |||||||||
ADORA2A | rs2236624 | C/T | 26 | CC + CT vs. TT | TT CC + CT | 11 84 | 7 145 | 18 261 | 0.37 (0.14–0.99) | 0.047 | 0.130 | Intronic |
DECTIN1 | rs11053624 | T/C | 9 | CC + TC vs. TT | TT CC + CT | 72 23 | 132 20 | 233 46 | 2.11 (1.08–4.10) | 0.028 | 0.086 | 5′ near gene |
 | rs7959451 | C/T | 14 | TT + CT vs. CC | CC TT + CT | 62 33 | 120 32 | 212 67 | 2.00 (1.12–3.55) | 0.018 | 0.061 | 3′ UTR |
IL13 | rs20541 | G/A | 20 | AA + GA vs. GG | GG AA + GA | 51 44 | 116 48 | 167 105 | 2.08 (1.23–3.53) | 0.006 | 0.025 | Exonic (R > Q): missense |
 | rs1800925 | C/T | 18 | TT + TC vs. CC | CC TT + TC | 53 42 | 115 49 | 186 87 | 1.86 (1.10–3.14) | 0.021 | 0.067 | 5′ near gene |
IL17A | rs3819024 | A/G | 36 | GG + GA vs. AA | AA GG + GA | 33 62 | 74 78 | 115 164 | 1.78 (1.05–3.02) | 0.032 | 0.097 | 5′ near gene |
IL4R | rs3024656 | G/A | 33 | GG + GA vs. AA | AA GG + GA | 3 92 | 22 141 | 33 239 | 4.78 (1.39–16.44) | 0.013 | 0.045 | Intronic |
 | rs1029489 | G/A | 39 | AA + GA vs. GG | GG AA + GA | 24 71 | 64 100 | 113 160 | 2.00 (1.14–3.52) | 0.016 | 0.054 | 3′ near gene |
 | rs6498012 | G/C | 38 | GG + GC vs. CC | CC GG + GC | 20 75 | 19 145 | 35 237 | 0.49 (0.25–0.98) | 0.043 | 0.122 | Intronic |
MBL2 | rs2099903 | C/A | 25 | CC + CA vs. AA | AA CC + CA | 11 84 | 6 146 | 21 258 | 0.31 (0.11–0.88) | 0.027 | 0.086 | 3′ UTR |
PLAT | rs8178880 | A/G | 4 | GG + AG vs. AA | AA GG + AG | 91 3 | 135 17 | 256 23 | 0.26 (0.07–0.92) | 0.036 | 0.108 | Intronic |
PLG | rs4252053 | A/G | 15 | GG + AG vs. AA | AA GG + AG | 64 31 | 122 30 | 194 85 | 1.97 (1.10–3.54) | 0.023 | 0.075 | 5′ near gene |
TLR3 | rs1879026 | G/T | 17 | TT + GT vs. GG | GG TT + GT | 75 20 | 94 57 | 197 82 | 0.44 (0.24–0.80) | 0.007 | 0.026 | Intronic |
 | rs10025405 | A/G | 43 | GG + GA vs. AA | AA GG + GA | 26 69 | 62 90 | 95 184 | 1.83 (1.05–3.18) | 0.033 | 0.100 | Intergenic (3′ of TLR3) |
 | rs5743303 | A/T | 19 | TT + AT vs. AA | AA TT + AT | 56 39 | 112 40 | 184 95 | 1.95 (1.13–3.36) | 0.016 | 0.56 | 5′ near gene |
 | rs5743305 | T/A | 37 | AA + TA vs. TT | TT AA + TA | 48 47 | 54 98 | 117 162 | 0.54 (0.32–0.91) | 0.020 | 0.67 | 5′ near gene |
 | rs7668666 | C/A | 26 | AA + CA vs. CC | CC AA + CA | 49 46 | 99 53 | 164 115 | 1.75 (1.04–2.96) | 0.035 | 0.105 | Intronic |